Browse of TCMCG024C06215 protein

CDS

Accession Number	TCMCG024C06215
gbkey	CDS
Protein Id	XP_021976642.1
Location	complement(join(97896331..97896445,97896544..97896911,97897000..97897185,97897269..97897445,97897614..97897745,97898349..97898570,97898719..97898796,97898899..97898964,97899029..97899109,97899194..97899894,97899968..97900149,97900234..97900328,97900441..97900578,97900694..97900771,97900890..97901018,97901111..97901245,97901311..97901421,97901510..97901561,97903380..97903511,97903953..97904005,97904521..97904616,97904707..97904852,97904915..97905047,97905690..97905843,97905965..97906117,97907378..97907700))
Gene	LOC110872161
GeneID	110872161
Organism	Helianthus annuus

Protein

Length	1411aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA396063
db_source	XM_022120950.2
Definition	cleavage and polyadenylation specificity factor subunit 1 [Helianthus annuus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTACGCAGCATACAAATTGATGCACCCACCCACCGGGATCGACAACTGCGCTTCAGGATTCATCACGCATTCTCCGGCCGACTTTCCGCCCCGCATTCAGACCGAAGATATCGACTCCGTGTGGTCCGCCACACCAACACCAGCTGCCGCTCCTATTCCTAACCTCATTGTCACCGCCGCAAACGTTCTAGAAGTTTATACAGTTAGGGTTTTGGAAGACGGTAATAAGGATTCGGTTACGGTAGCTCAACCGCAGCAGCGTGGTGGTCTCATGGCTGGCCTTTCTGGTGCTTCCTTAGAACTTGTTTGTAGTTACAGGTTGCATGGTAATGTGGAATCAGTAGGTGTGCTGTCTTCTGGAGCAGAGGACCGGACAAGTGGCAGAAGAAGAGATTCTATCATCTTAACTTTTCGCGATGCAAAAATCTCAGTTTTAGAATTTGATGATTCAGTTTATGGACTTCGTACAAGTTCAATGCACTGCTTTGAGGGCCCACAGTGGCTTCATTTGAAAAAAGGCAGAGAAAGTTTTGCCAGAGGGCCGTTAATCAAAGCCGATCCTCTGGGCAGGTGTGCAGGAGTGCTTGTTTATGGTCTACAGATGATAATGCTTAAAGCTGCTGAGGCTGGTGGTCTGGTGGGTGATGATGGTGGTTCTAGTAGCGGGGGCTCAGTTTCTGCACGTATACAATCATCGTATATGATTAGTTTACGAGATCTTGATGTCAAGCATGTCAAAGATTTTATATTTGTTCATGGTTACATTGAACCGGTGTTGGTGATTCTTCATGAGAAAGAACTCACTTGGGCTGGGCGGCTCCCATATAAGCATCATACTTGCGTAATTTCTGCACTAAGTATCAGTACCACTTTGAAGCAGCATCCACTCATATGGTCTGCCACTAATCTTCCACATGATGCCTATAAGCTTCTTGCTGTGCCATCTCCAATCGGTGGAGTTGTTGTAGTTTGTGCAAATACTATTCATTATCATAGCCAGTCGGCATCGTGCATATTGGCTTTAAATAATTATGCTGCTCCCGTGGATAGCAGTCAAGAAATGTCAAGATCAAGTTTTAGCGTGGAGCTTGATGCTGCAAATGCAACTTGGTTATCAAATGATGTTGCCATGCTGTCAACAAAATCTGGAGAACTACTCTTGCTGACACTTGTTCATGATGGGCGGATTGTGCAGAAACTTGATCTTTCCAAGTCAAAGGCTTCCGTATTAACTTCGGGAATCACCACTGTTGGAAGCTCTTTCTTTTTTCTTGGGAGTCGTCTAGGAGATAGTTTGCTTGTGCAGTTCCATTGTGGAGCAGGATCCTCTATGGGTCCAAAGGAAGAGGTTGGTGATATTGAAGGCGATCTTCCATCAACTAAACGACTAAGAAGATCTTCCTCTGATGCTTTGCAAGATATGGCAAATGATGATGAACTTTCATTGTATGGCTCGGATCTCAACAACGCACAGTCATCCCAGAAAACGTTCTCGTTTACTGTGAGGGATTCTTTGATTAATGTTGGTCCATTGAAAGACTTCTCCTATGGTATGCGTATGAATACCGATCCAAATGCAACAGGGGTTGCTAAACAAAGTAATTATGAACTTGTATGCTGTTCTGGCCATGGAAAGAACGGTTCTCTCTGCGTGCTTCAGCGGTCTATTCGTCCAGAAATTATCACCCAAGAATCTATACCAGGCTGTAAGGGGCTTTGGACTGTCTATCACAAAAGTTCACGCAATCAAGCTGAACATTCAAAAACAGCAACTGAAGATGAAGAATATCATGCGTATTTAATTATCAGTTTGGAAAGTCGGACAATGGTGTTACAGACAGTAAGTAATCTTGAGGAGGTGACAGAAAATGTGGATTATTTTGTTCAAGGAAGTACCATTTACGTTGGGAATCTTTTTGGAAGGAGGCGAGTGATACAAGTGTACTCTCGTGGTGCTCGGATTCTTGATGGTGCTTTCATGACTCAAGATTTAAGCTTTCGAGCTACAAATTCAGAAGCTGCTATGACCGTGTCATCTGTCTCCATTGCTGATCCTTACGTATTATTAATGATGACTGATGGAAGTATTCAGCTTCTTGTTGGAGACCCCTCCACGTGCACCATGAGCATCAACAATCTAGCATCATTTCAGACCTCTAAGAAATCAATAACCGCCTGTACACTTTATCACGATAGAGGAACAGAACCATGGCTTAGAAAAACAAGTACTGATGCGTGGCTTTTGACCGGTGTCAGTGAAGCAGCAGTTGAAGGACCTGATCCTGATCAGGGTGATATCTACTGTGTGATTTGTTACGAAAGTGGGACCCTTGAAATATACGATGTTCCCAACTTCTCTTGTGTTTTTTCTGTCGATAGCTTTGTGTCAGGAAGACTTTTTATTGGAGATAACTTATTCCAAGAATCTTCCGATGATTCTCAGAAATTATCTCAAAACATGAAGGTTGTTGAATTGGCTATGCATAGGTGGCATGGAGAAAATAGCCGCCCGTTTCTTTTTGGAATATTGACTGACGGAACCATTCTTTGTTATCATGCATACATGTATGAAGAAGGTTCAGAAAATGCTTCTAAAAGTCAACCAGTTAATACTTCAAGGCTTAAAAATCTTAGATTTTCACGCGTTTCTTTGGATACATACACAAGAGAAGAGATGTCAGCAGAAACCCATTTTCCCCGAATAACAATGTTTAAAAACGTTGGCGGGTGCCCGGGTTTCTTTCTATCGGGCTCAAGGCCCGCTTGGTTCATGAAGTTCAGAGAACGTATTCGAATTCATCCACAGCTTTGTGATGGACCAATTATCGCCTTTACAGTTCTTCATAACGTGTACTGTAACCATGGGTTCATTTATGTAACCTCACAGGGTACGTTGAAGATCTGCCAACTTCCATCTTTGTCAGCATATGACAATTATTGGCCAGTACAAAAGATCCCATTGAAGGCCACTCCGCATCAAGTAACATACTTTGCTGAGAAGAACCTATACCCGCTTATTGTTTCTGTTCCTGTCTCAAAGCCTATAAATCAAGTGCTATCAACTCTGGTTGATCAAGAATCTGGCCACCAAATCGAGCATGATAATTTAAACCTTGATGGTACTTATACTGTTGAAGAATTCGAGGTTAGAATTTTGGAACCAGAGAGTTCTGGAGGGCCATGGCAAACAAAAGGAACGATTCACATGCAAACTTCTGAGAATGCGTTAACTGTCAGAGTGGTTACATTATCTAATACAACAACAAGAGAGAATGAAACTCTTTTGGCAATTGGGACTGCCTATGTGCAAGGGGAAGATGTAGCTGCAAGAGGACGTGTTCTTTTGTTCTCAGTTGAAAATAGCACCGAGAATTCACCGGCAAAGGTCACCGAGGTCTACTCAAAGGAAATGAAAGGTGCCATATCAGCATTAGCTTCTATTCAAGGTTATCTATTAGTTGCTTCAGGCCCAAAAGTTATCCTACACAAGTGGACCGGTTCTGAGTTGAACGGTGTTGCTTTTTTCGATGCCCCACCACTTTATGTAGTCAGCTTAAATATTGTCAAGAATTTTATTCTGATTGGAGATATTCACAAAAGCATTTATTTCTTAAGTTGGAAAGAAAACGGATCTCAGTTGACTTTACTGGCTAAGGATTTTGGCTCTCTGGACTGCTTTGCAACAGAGTTTCTGATCGACGGGAGCACTCTTAGCCTGATGGTTTCCGATGACCAAAAGAATGTGCAGATATTTTATTATGCACCAAAAGTGTCGGAAAGCTGGAAAGGACAGAAACTACTTTCACGGGCCGAGTTTCATGTGGGGGCACATGTGACTAAATTTCTCCGGTTACAGATGCTTCCAGCTTCTTCTACTGGTTCTGATAAAACAAACCGTTTCGCCCTTGTGTTTGGAACCCTAGATGGCAGCATTGGGTGTATTGCACCGCTTGATGAACTAACATTCCGTAGGCTCCAATCACTGCAGAAAAAACTTGTAGATGCTGTTCCTCATGTTGCTGGATTAAATCCCAGATCTTTCCGCCAGTTCCATTCCAATGGAAAGGCTCACCGCCCCGGGCCCGACAGCATAGTGGACTGTGAGCTGCTGTGTCATTATGATATGCTCCCATTTGAGCATCAGCATGAAATTGCTAACCAGATTGGGACGACGCGATCACAGATCATTTCAAATTTGAATGACCTGGCACTTGGTACTAGCTTCTTGTGA

Protein:   MSYAAYKLMHPPTGIDNCASGFITHSPADFPPRIQTEDIDSVWSATPTPAAAPIPNLIVTAANVLEVYTVRVLEDGNKDSVTVAQPQQRGGLMAGLSGASLELVCSYRLHGNVESVGVLSSGAEDRTSGRRRDSIILTFRDAKISVLEFDDSVYGLRTSSMHCFEGPQWLHLKKGRESFARGPLIKADPLGRCAGVLVYGLQMIMLKAAEAGGLVGDDGGSSSGGSVSARIQSSYMISLRDLDVKHVKDFIFVHGYIEPVLVILHEKELTWAGRLPYKHHTCVISALSISTTLKQHPLIWSATNLPHDAYKLLAVPSPIGGVVVVCANTIHYHSQSASCILALNNYAAPVDSSQEMSRSSFSVELDAANATWLSNDVAMLSTKSGELLLLTLVHDGRIVQKLDLSKSKASVLTSGITTVGSSFFFLGSRLGDSLLVQFHCGAGSSMGPKEEVGDIEGDLPSTKRLRRSSSDALQDMANDDELSLYGSDLNNAQSSQKTFSFTVRDSLINVGPLKDFSYGMRMNTDPNATGVAKQSNYELVCCSGHGKNGSLCVLQRSIRPEIITQESIPGCKGLWTVYHKSSRNQAEHSKTATEDEEYHAYLIISLESRTMVLQTVSNLEEVTENVDYFVQGSTIYVGNLFGRRRVIQVYSRGARILDGAFMTQDLSFRATNSEAAMTVSSVSIADPYVLLMMTDGSIQLLVGDPSTCTMSINNLASFQTSKKSITACTLYHDRGTEPWLRKTSTDAWLLTGVSEAAVEGPDPDQGDIYCVICYESGTLEIYDVPNFSCVFSVDSFVSGRLFIGDNLFQESSDDSQKLSQNMKVVELAMHRWHGENSRPFLFGILTDGTILCYHAYMYEEGSENASKSQPVNTSRLKNLRFSRVSLDTYTREEMSAETHFPRITMFKNVGGCPGFFLSGSRPAWFMKFRERIRIHPQLCDGPIIAFTVLHNVYCNHGFIYVTSQGTLKICQLPSLSAYDNYWPVQKIPLKATPHQVTYFAEKNLYPLIVSVPVSKPINQVLSTLVDQESGHQIEHDNLNLDGTYTVEEFEVRILEPESSGGPWQTKGTIHMQTSENALTVRVVTLSNTTTRENETLLAIGTAYVQGEDVAARGRVLLFSVENSTENSPAKVTEVYSKEMKGAISALASIQGYLLVASGPKVILHKWTGSELNGVAFFDAPPLYVVSLNIVKNFILIGDIHKSIYFLSWKENGSQLTLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNVQIFYYAPKVSESWKGQKLLSRAEFHVGAHVTKFLRLQMLPASSTGSDKTNRFALVFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYDMLPFEHQHEIANQIGTTRSQIISNLNDLALGTSFL